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Friday 30th of July 2010

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Tools
Scientific tools
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# Web Link Hits
1   Link   Bacteriorhodopsin/Rhodopsin Viewer
Double Chime viewer for Bacteriorhodopsin and Rhodopsin. 		57
2   Link   Molecular Animator
Creates animations of molecules with the use of Chime. 		53
3   Link   MijnMailBox
Webinterface for reading mail from whatever POP3 mail server from your browser window. 		74
4   Link   FlashMol
Graphical Interface for the plug-in Chime, for viewing molecules in 3-D. 		57
5   Link   Pu bQuery
Queries PubMed through a user-friendly interface and gives the output in the desired format. 		48
6   Link   InsExt
Extracts insert sequences from report files. 		51
7   Link   PromScan
Scans through several databases for promoter information about your query sequence(s). 		78
8   Link   PDBSpam
PDBSpam sends a specified number of e-mails to a specified e-mail address. To each e-mail a random PDB file is attached. The perfect way to pay back your spammers! 		56
9   Link   MAAT
MAAT (Multiple Alignment Analysis Tool) analyzes any multiple alignment for specified proteins and at specified positions. It can also calculate correlated positions. 		52
10   Link   OrthoPhyle
OrthoPhyle gets orthologs from one or more phylogenetic trees in PHYLIP format. 		70
11   Link   PhyloPat
Phylopat shows the phylogenetic pattern for each gene in the Ensembl database. Groups of genes can be selected by choosing a phylogenetic pattern. 		79
12   Link   BioVenn
BioVenn is an easy-to-use web application to generate area-proportional Venn diagrams from lists of biological identifiers. 		68

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